Sequential Factorized Autoencoder for Localizing the Origin of Ventricular Activation from 12-Lead Electrocardiograms

Prashnna Kumar Gyawali, B. Milan Horacek, John L. Sapp, Linwei Wang

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28 Citations (Scopus)

Abstract

Objective: This work presents a novel approach to handle the inter-subject variations existing in the population analysis of ECG, applied for localizing the origin of ventricular tachycardia (VT) from 12-lead electrocardiograms (ECGs). Methods: The presented method involves a factor disentangling sequential autoencoder (f-SAE) - realized in both long short-term memory (LSTM) and gated recurrent unit (GRU) networks - to learn to disentangle the inter-subject variations from the factor relating to the location of origin of VT. To perform such disentanglement, a pair-wise contrastive loss is introduced. Results: The presented methods are evaluated on ECG dataset with 1012 distinct pacing sites collected from scar-related VT patients during routine pace-mapping procedures. Experiments demonstrate that, for classifying the origin of VT into the predefined segments, the presented f-SAE improves the classification accuracy by 8.94% from using prescribed QRS features, by 1.5% from the supervised deep CNN network, and 5.15% from the standard SAE without factor disentanglement. Similarly, when predicting the coordinates of the VT origin, the presented f-SAE improves the performance by 2.25 mm from using prescribed QRS features, by 1.18 mm from the supervised deep CNN network and 1.6 mm from the standard SAE. Conclusion: These results demonstrate the importance as well as the feasibility of the presented f-SAE approach for separating inter-subject variations when using 12-lead ECG to localize the origin of VT. Significance: This work suggests the important research direction to deal with the well-known challenge posed by inter-subject variations during population analysis from ECG signals.

Original languageEnglish
Article number8822994
Pages (from-to)1505-1516
Number of pages12
JournalIEEE Transactions on Biomedical Engineering
Volume67
Issue number5
DOIs
Publication statusPublished - May 2020

Bibliographical note

Funding Information:
Manuscript received May 6, 2019; revised July 15, 2019; accepted August 22, 2019. Date of publication September 3, 2019; date of current version April 21, 2020. This work was supported in part by National Institute of Health under Awards R15HL140500 and R01HL145590, in part by the National Science Foundataion under Award ACI-1350374, and in part by the investigator-initiated research Grant from Biosense Webster. (Corresponding author: Prashnna Kumar Gyawali.) P. K. Gyawaliis is with the B. Thomas Golisano College of Computing and Information Science, Rochester Institute of Technology, Rochester, NY 14623 USA (e-mail:,pkg2182@rit.edu).

Publisher Copyright:
© 1964-2012 IEEE.

ASJC Scopus Subject Areas

  • Biomedical Engineering

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Gyawali, P. K., Horacek, B. M., Sapp, J. L., & Wang, L. (2020). Sequential Factorized Autoencoder for Localizing the Origin of Ventricular Activation from 12-Lead Electrocardiograms. IEEE Transactions on Biomedical Engineering, 67(5), 1505-1516. Article 8822994. https://doi.org/10.1109/TBME.2019.2939138