10KP: A phylodiverse genome sequencing plan

Shifeng Cheng; Michael Melkonian; Stephen A. Smith; Samuel Brockington; John M. Archibald; Pierre Marc Delaux; Fay Wei Li; Barbara Melkonian; Evgeny V. Mavrodiev; Wenjing Sun; Yuan Fu; Huanming Yang; Douglas E. Soltis; Sean W. Graham; Pamela S. Soltis; Xin Liu; Xun Xu; Gane Ka Shu Wong

doi:10.1093/gigascience/giy013

10KP: A phylodiverse genome sequencing plan

Shifeng Cheng, Michael Melkonian, Stephen A. Smith, Samuel Brockington, John M. Archibald, Pierre Marc Delaux, Fay Wei Li, Barbara Melkonian, Evgeny V. Mavrodiev, Wenjing Sun, Yuan Fu, Huanming Yang, Douglas E. Soltis, Sean W. Graham, Pamela S. Soltis, Xin Liu, Xun Xu, Gane Ka Shu Wong

Medicine

Producción científica: Contribución a una revista › Comentario/debate › revisión exhaustiva

169 Citas (Scopus)

Resumen

Understanding plant evolution and diversity in a phylogenomic context is an enormous challenge due, in part, to limited availability of genome-scale data across phylodiverse species. The 10KP (10,000 Plants) Genome Sequencing Project will sequence and characterize representative genomes from every major clade of embryophytes, green algae, and protists (excluding fungi) within the next 5 years. By implementing and continuously improving leading-edge sequencing technologies and bioinformatics tools, 10KP will catalogue the genome content of plant and protist diversity and make these data freely available as an enduring foundation for future scientific discoveries and applications. 10KP is structured as an international consortium, open to the global community, including botanical gardens, plant research institutes, universities, and private industry. Our immediate goal is to establish a policy framework for this endeavor, the principles of which are outlined here.

Idioma original	English
Páginas (desde-hasta)	1-9
Número de páginas	9
Publicación	GigaScience
Volumen	7
N.º	3
DOI	https://doi.org/10.1093/gigascience/giy013
Estado	Published - mar. 1 2018

Nota bibliográfica

Funding Information:
We acknowledge many individuals who provided support in various aspects. Min Liu, Fengzhen Chen, Lei Chen, Xiaofeng Wei, and Sanjie Jiang from BGI contributed to the construction of the 10KP website. This project was supported by the Shen-zhen Municipal Government of China (JCYJ20150529150409546, JCYJ20150529150505656).

Publisher Copyright:
© The Author(s) 2018.

ASJC Scopus Subject Areas

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PubMed: MeSH publication types

Journal Article
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N2 - Understanding plant evolution and diversity in a phylogenomic context is an enormous challenge due, in part, to limited availability of genome-scale data across phylodiverse species. The 10KP (10,000 Plants) Genome Sequencing Project will sequence and characterize representative genomes from every major clade of embryophytes, green algae, and protists (excluding fungi) within the next 5 years. By implementing and continuously improving leading-edge sequencing technologies and bioinformatics tools, 10KP will catalogue the genome content of plant and protist diversity and make these data freely available as an enduring foundation for future scientific discoveries and applications. 10KP is structured as an international consortium, open to the global community, including botanical gardens, plant research institutes, universities, and private industry. Our immediate goal is to establish a policy framework for this endeavor, the principles of which are outlined here.

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10KP: A phylodiverse genome sequencing plan

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